Protein BLAST: search protein databases using a protein query
BlastP simply compares a protein query to a protein database. PSI-BLAST allows the user to build a PSSM (position-specific scoring matrix) using the results of the first BlastP run. PHI-BLAST …
BLASTp outfmt 6输出格式的解读 - 简书
2020年9月12日 · 跑了blastp发现输出格式没有标题： 查找了一下，列名分别为： qseqid query (e.g., unknown gene) sequence id sseqid s...
Basic Local Alignment Search Tool - BLAST
2025年3月17日 · The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences. The program compares nucleotide or protein sequences to sequence …
Introduction to NCBI Bioinformatics Resources: BLAST Results
2022年2月28日 · BLAST Results. Analyzing the results of a BLAST search, while similar, will depend on whether the original search was for a nucleotide or amino acid sequence. Looking …
4.3 - Interpreting BLAST results - High Throughput Sequencing
Learn how to interpret BLAST results ; Understand the meaning of identity, coverage, e-value, and bitscore metrics; Keypoints¶ Interpreting the results of BLAST alignments requires thought …
Running Local BLAST and Parsing Output - GitHub Pages
Summarize BLAST results by parsing output file with a BioPerl script. 4. Run BLASTN search. 5. Plot data in R. Identifying and aligning similar DNA and protein sequences is one of the most …
Protein BLAST: search protein databases using a protein query
QuickBLASTP is an accelerated version of BLASTP that is very fast and works best if the target percent identity is 50% or more. BlastP simply compares a protein query to a protein …
BLAST · Biopython Tutorial
In this tutorial, you will automate BLAST queries with Python. You will learn how to run BLAST locally, multiple times, and how to read BLAST results with Python. In the process, you will …
深度解析BlastP：揭秘蛋白质序列比对的神器 - 云原生实践
2024年11月20日 · BlastP是一种基于BLAST（Basic Local Alignment Search Tool）算法的蛋白质序列比对工具，它被广泛应用于生物信息学领域，用于发现蛋白质序列之间的相似性。 BlastP …
BLASTP - BLAST - NGDC
Protein-Protein BLAST (blastp) Short queries (blastp-short) Algorithm Parameters BLAST. Search in Databases: Protist 10K Genomes Project Proteins Using Program: ... Show results in a new …